TY - JOUR
T1 - Electronic excitation processes in single-strand and double-strand DNA
T2 - A computational approach
AU - Plasser, Felix
AU - Aquino, Adélia J.A.
AU - Lischka, Hans
AU - Nachtigallová, Dana
N1 - Funding Information:
This work was supported by the Austrian Science Fund within the framework of the Special Research Program F41, Vienna Computational Materials Laboratory (ViCoM). We also acknowledge technical support from and computer time at the Vienna Scientific Cluster (Projects 70019 and 70151). Support was also provided by the Robert A. Welch Foundation under Grant No. D-0005. FP is a recipient of a research fellowship by the Alexander von Humboldt Foundation. This work has been supported by the grants of the Grant Agency of the Czech Republic (P208/12/1318) and the grant of the Czech Ministry of Education, Youth and Sport (LH11021). The research at IOCB was part of the project RVO:61388963.
Publisher Copyright:
© Springer-Verlag Berlin Heidelberg 2014.
PY - 2015
Y1 - 2015
N2 - Absorption of UV light by nucleic acids can lead to damaging photoreactions, which may ultimately lead to mutations of the genetic code. The complexity of the photodynamical behavior of nucleobases in the DNA double-helix provides a great challenge to both experimental and computational chemists studying these processes. Starting from the initially excited states, the main question regards the understanding of the subsequent relaxation processes, which can either utilize monomer-like deactivation pathways or lead to excitonic or charge transfer species with new relaxation dynamics. After a review of photophysical processes in single nucleobases we outline the theoretical background relevant for interacting chromophores and assess a large variety of computational approaches relevant for the understanding of the nature and dynamics of excited states of DNA. The discussion continues with the analysis of calculations on excitonic and charge transfer states followed by the presentation of the dynamics of excited-state processes in DNA. The review is concluded by topics on proton transfer in DNA and photochemical dimer formation of nucleobases.
AB - Absorption of UV light by nucleic acids can lead to damaging photoreactions, which may ultimately lead to mutations of the genetic code. The complexity of the photodynamical behavior of nucleobases in the DNA double-helix provides a great challenge to both experimental and computational chemists studying these processes. Starting from the initially excited states, the main question regards the understanding of the subsequent relaxation processes, which can either utilize monomer-like deactivation pathways or lead to excitonic or charge transfer species with new relaxation dynamics. After a review of photophysical processes in single nucleobases we outline the theoretical background relevant for interacting chromophores and assess a large variety of computational approaches relevant for the understanding of the nature and dynamics of excited states of DNA. The discussion continues with the analysis of calculations on excitonic and charge transfer states followed by the presentation of the dynamics of excited-state processes in DNA. The review is concluded by topics on proton transfer in DNA and photochemical dimer formation of nucleobases.
KW - Ab initio calculations
KW - Charge transfer excited states
KW - Excitonic states
KW - Interaction of excited state nucleic acid bases
KW - Photodynamics
KW - UV absorption spectra
UR - http://www.scopus.com/inward/record.url?scp=84924265164&partnerID=8YFLogxK
U2 - 10.1007/128_2013_517
DO - 10.1007/128_2013_517
M3 - Article
C2 - 24549841
AN - SCOPUS:84924265164
SN - 0340-1022
VL - 356
SP - 1
EP - 38
JO - Topics in Current Chemistry
JF - Topics in Current Chemistry
ER -