TY - JOUR
T1 - Efficacy of different dynamic functional connectivity methods to capture cognitively relevant information
AU - Xie, Hua
AU - Zheng, Charles Y.
AU - Handwerker, Daniel A.
AU - Bandettini, Peter A.
AU - Calhoun, Vince D.
AU - Mitra, Sunanda
AU - Gonzalez-Castillo, Javier
N1 - Funding Information:
This research was possible because of the support of the National Institute of Mental Health Intramural Research Program. This study is part of NIH clinical protocol number NCT00001360, protocol ID 93-M-0170 and annual report ZIAMH002783-14. This work was also partially supported by NIH grants P20GM103472 and R01EB020407 and NSF grant 1539067.
Funding Information:
This research was possible because of the support of the National Institute of Mental Health Intramural Research Program. This study is part of NIH clinical protocol number NCT00001360 , protocol ID 93-M-0170 and annual report ZIAMH002783-14. This work was also partially supported by NIH grants P20GM103472 and R01EB020407 and NSF grant 1539067 .
Publisher Copyright:
© 2018 Elsevier Inc.
PY - 2019/3
Y1 - 2019/3
N2 - Given the dynamic nature of the human brain, there has been an increasing interest in investigating short-term temporal changes in functional connectivity, also known as dynamic functional connectivity (dFC), i.e., the time-varying inter-regional statistical dependence of blood oxygenation level-dependent (BOLD) signal within the constraints of a single scan. Numerous methodologies have been proposed to characterize dFC during rest and task, but few studies have compared them in terms of their efficacy to capture behavioral and clinically relevant dynamics. This is mostly due to lack of a well-defined ground truth, especially for rest scans. In this study, with a multitask dataset (rest, memory, video, and math) serving as ground truth, we investigated the efficacy of several dFC estimation techniques at capturing cognitively relevant dFC modulation induced by external tasks. We evaluated two framewise methods (dFC estimates for a single time point): dynamic conditional correlation (DCC) and jackknife correlation (JC); and five window-based methods: sliding window correlation (SWC), sliding window correlation with L1-regularization (SWC_L1), a combination of DCC and SWC called moving average DCC (DCC_MA), multiplication of temporal derivatives (MTD), and a variant of jackknife correlation called delete-d jackknife correlation (dJC). The efficacy is defined as each dFC metric's ability to successfully subdivide multitask scans into cognitively homogenous segments (even if those segments are not temporally continuous). We found that all window-based dFC methods performed well for commonly used window lengths (WL ≥ 30sec), with sliding window methods (SWC, SWC_L1) as well as the hybrid DCC_MA approach performing slightly better. For shorter window lengths (WL ≤ 15sec), DCC_MA and dJC produced the best results. Neither framewise method (i.e., DCC and JC) led to dFC estimates with high accuracy.
AB - Given the dynamic nature of the human brain, there has been an increasing interest in investigating short-term temporal changes in functional connectivity, also known as dynamic functional connectivity (dFC), i.e., the time-varying inter-regional statistical dependence of blood oxygenation level-dependent (BOLD) signal within the constraints of a single scan. Numerous methodologies have been proposed to characterize dFC during rest and task, but few studies have compared them in terms of their efficacy to capture behavioral and clinically relevant dynamics. This is mostly due to lack of a well-defined ground truth, especially for rest scans. In this study, with a multitask dataset (rest, memory, video, and math) serving as ground truth, we investigated the efficacy of several dFC estimation techniques at capturing cognitively relevant dFC modulation induced by external tasks. We evaluated two framewise methods (dFC estimates for a single time point): dynamic conditional correlation (DCC) and jackknife correlation (JC); and five window-based methods: sliding window correlation (SWC), sliding window correlation with L1-regularization (SWC_L1), a combination of DCC and SWC called moving average DCC (DCC_MA), multiplication of temporal derivatives (MTD), and a variant of jackknife correlation called delete-d jackknife correlation (dJC). The efficacy is defined as each dFC metric's ability to successfully subdivide multitask scans into cognitively homogenous segments (even if those segments are not temporally continuous). We found that all window-based dFC methods performed well for commonly used window lengths (WL ≥ 30sec), with sliding window methods (SWC, SWC_L1) as well as the hybrid DCC_MA approach performing slightly better. For shorter window lengths (WL ≤ 15sec), DCC_MA and dJC produced the best results. Neither framewise method (i.e., DCC and JC) led to dFC estimates with high accuracy.
KW - Cognitive information
KW - Dynamic conditional correlation
KW - Dynamic functional connectivity
KW - Jackknife correlation
KW - Multiplication of temporal derivatives
KW - Sliding window correlation
UR - http://www.scopus.com/inward/record.url?scp=85059153793&partnerID=8YFLogxK
U2 - 10.1016/j.neuroimage.2018.12.037
DO - 10.1016/j.neuroimage.2018.12.037
M3 - Article
C2 - 30576850
AN - SCOPUS:85059153793
SN - 1053-8119
VL - 188
SP - 502
EP - 514
JO - NeuroImage
JF - NeuroImage
ER -