TY - JOUR
T1 - Direct dynamics simulations of collision- and surface-induced dissociation of n-protonated glycine. Shattering fragmentation
AU - Meroueh, Samy O.
AU - Wang, Yanfei
AU - Hase, William L.
PY - 2002/10/24
Y1 - 2002/10/24
N2 - Direct dynamics classical trajectory simulations are used to study energy transfer and unimolecular dissociation in collisions of N-protonated glycine, (gly-H)+, with an argon atom and a hydrogenated diamond {111} surface. The (gly-H)+ potential is represented by the AM1 semiempirical electronic structure theory and analytic potentials developed previously are used for the diamond surface and the (gly-H)+/Ar and (gly-H)+/ diamond intermolecular potentials. The AM1 potential for (gly-H)+ gives the same collisional energy transfer distributions as does the AMBER empirical force field. For (gly-H)+ + diamond {111} at a collision energy and angle of 70 eV and 45°, the average percent energy transfer to (gly-H)+ vibration/rotation, to the surface, and to final ion translation are 12, 38, and 50, respectively. A distribution of (gly-H)+ dissociation products are observed in these collisions, with ∼55% of the dissociations occurring while (gly-H)+ collides with the surface, i.e., shattering fragmentation. Shattering is initiated when the orientation of (gly-H)+ and the "hardness" of the collision "drives" a H-atom from CH2 to the carbonyl carbon or a H-atom from NH3 to the carbonyl oxygen or ejects a H2 molecule from NH3. Shattering is not important in (gly-H)+ collisions with Ar at 13 eV and an impact parameter of zero, but as found for the surface collisions, the Ar collision may "force" H-atom transfer. The simulations suggest that nonstatistical fragmentation dynamics may be important in the collisional dissociation of protonated amino acids and peptides. The collision may directly "drive" the ion to a fragmentation transition state structure.
AB - Direct dynamics classical trajectory simulations are used to study energy transfer and unimolecular dissociation in collisions of N-protonated glycine, (gly-H)+, with an argon atom and a hydrogenated diamond {111} surface. The (gly-H)+ potential is represented by the AM1 semiempirical electronic structure theory and analytic potentials developed previously are used for the diamond surface and the (gly-H)+/Ar and (gly-H)+/ diamond intermolecular potentials. The AM1 potential for (gly-H)+ gives the same collisional energy transfer distributions as does the AMBER empirical force field. For (gly-H)+ + diamond {111} at a collision energy and angle of 70 eV and 45°, the average percent energy transfer to (gly-H)+ vibration/rotation, to the surface, and to final ion translation are 12, 38, and 50, respectively. A distribution of (gly-H)+ dissociation products are observed in these collisions, with ∼55% of the dissociations occurring while (gly-H)+ collides with the surface, i.e., shattering fragmentation. Shattering is initiated when the orientation of (gly-H)+ and the "hardness" of the collision "drives" a H-atom from CH2 to the carbonyl carbon or a H-atom from NH3 to the carbonyl oxygen or ejects a H2 molecule from NH3. Shattering is not important in (gly-H)+ collisions with Ar at 13 eV and an impact parameter of zero, but as found for the surface collisions, the Ar collision may "force" H-atom transfer. The simulations suggest that nonstatistical fragmentation dynamics may be important in the collisional dissociation of protonated amino acids and peptides. The collision may directly "drive" the ion to a fragmentation transition state structure.
UR - http://www.scopus.com/inward/record.url?scp=0037168352&partnerID=8YFLogxK
U2 - 10.1021/jp020664q
DO - 10.1021/jp020664q
M3 - Article
AN - SCOPUS:0037168352
SN - 1089-5639
VL - 106
SP - 9983
EP - 9992
JO - Journal of Physical Chemistry A
JF - Journal of Physical Chemistry A
IS - 42
ER -